Software

  • eCAMBer v1.08 (last update: 11.03.2015)
    • Project repository on bitbucket.
    • Windows 64bit version of eCAMBer (with Windows 64bit BLAST executable).
    • Windows 32bit version of eCAMBer (with Windows 32bit BLAST executable).
    • Linux 64bit version of eCAMBer (with Linux 64bit BLAST executable).
    • Linux 32bit version of eCAMBer (with Linux 32bit BLAST executable).
    • Mac OS version of eCAMBer (with BLAST executable).
    • eCAMBer without BLAST executable, user's path to BLAST has to be provided in the config file (details in user's manual).
    • eCAMBer user's manual
    • Presentation about eCAMBer
  • CAMBerVis v1.07 (compatible with eCAMBer, last update: 17.02.2014)
    • Project repository on bitbucket.
    • CAMBerViS Windows installer
    • CAMBerViS Linux installer
    • CAMBerViS MAC OS installer
    • CAMBerViS software (zip package, executables in the bin folder)
    • Manual for CamberVis
    • Example 1 of CAMBerVis usage to identify inconsistent annotations of TISs (Translation Initiation Sites)
    • Example 2 of CAMBerVis usage to identify highly conserved gene families, but annotated in very few strains
    • Two step-by-step examples of using eCAMBer to generate and plug-in input data to CAMBerVis are available in eCAMBer user's manual
    • Video - example of CamberVis (.avi in zip package)
    • Video - example of an older version of CamberVis (.avi in zip package)
  • Older versions of the software are available here.
  • EvAnn: small software we used for evaluation of eCAMBer and other comparative annotation tools, available of bitbucket

  • Source code of an old version CAMBerVis is freely available at the project code.google website: http://code.google.com/p/camber2/.
  • CAMBer (deprecated) The software, user's manual and case studies for CAMBer are available on the project webpage.