DrML - Maximum Likelihood Estimation in the Duplication Loss Model(c) Copyright 2012 by P.Gorecki and O.EulensteinContents
General description
DrML is a program for estimating maximum likelihood of evolutionary scenarios and computing
optimal evolutionary scenarios in the duplication-loss model
based on results presented in [1].
Click here for the description of the software. File included in the package below. Downloads
DrML sources (use "tar xzvf drml10.tgz" to uncompress): drml10.tgz
The result of experiments
Examples
The trees taken from version 7 of:
http://treefam.org.
Branch lengths in the species tree taken from
http://www.timetree.org/.
Rooted trees from unrooted TreeFam trees computed by:
URec.
Input files
The sets of gene and species trees:
Bibliography
Maximum likelihood models and algorithms for gene tree evolution with duplications and losses
P. Górecki, G. Burleigh, O. Eulenstein, BMC bioinformatics 12 (Suppl 1), S15, 2011
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